miRBase entry: ppy-mir-892a

Stem-loop ppy-mir-892a


Accession
MI0015163
Description
Pongo pygmaeus ppy-mir-892a precursor miRNA
Gene family
MIPF0000386; mir-743


Sequence

cagugcccuacuuagaaaggugccagucacuuacacuacauguCACUGUGUCCUUUCUGUGUAGaguaaggcuc
....(((((((.((((((((.((((((.((...........)).)))).)))))))))).)))).....)))..

Structure
cagu   -----    u        u  -    c  uuac 
    gcc     cuac uagaaagg gc cagu ac    a
    |||     |||| |||||||| || |||| ||    c
    cgg     GAUG GUCUUUCC UG GUCA ug    u
--cu   aauga    U        -  U    C  uaca 


Annotation confidence Not enough data
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Genome context
chrX: 145870420-145870493 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from ppy-mir-892a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-892a

Accession MIMAT0016128
Description Pongo pygmaeus ppy-miR-892a mature miRNA
Sequence 44 - CACUGUGUCCUUUCUGUGUAG - 64
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64