Stem-loop ppy-mir-943

Accession

MI0015176

Description

Pongo pygmaeus ppy-mir-943 precursor miRNA

Gene family

MIPF0000690; mir-943

Sequence

gggacguucugggcucagagggggugggggacguuugccggucacugcugcuggccCUGACUGUUGCUGUCCUCCAGccccacucaaaggcauccc
((((.((((((....))))((((.(((((((((...((((((((..(((...)))..))))))..))))))))))).))))........)).))))

Structure

    c  ucugggcucaga    g         uuu  --      cu   g 
ggga gu            gggg ugggggacg   gc  cgguca  gcu  
|||| ||            |||| |||||||||   ||  ||||||  ||| c
cccu cg            cccc ACCUCCUGU   CG  GUCAGU  cgg  
    a  ----gaaacuca    G         ---  UU      Cc   u 

Annotation confidence Not enough data

Genome context

chr4: 1983472-1983567 [-]

Mature ppy-miR-943

• Accession: MIMAT0016141
• Description: Pongo pygmaeus ppy-miR-943 mature miRNA
• Sequence: 57 - CUGACUGUUGCUGUCCUCCAG - 77
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64