miRBase entry: ppy-mir-1178

Stem-loop ppy-mir-1178


Accession
MI0015178
Description
Pongo pygmaeus ppy-mir-1178 precursor miRNA
Gene family
MIPF0000601; mir-1178

Literature search
1 open access papers mention ppy-mir-1178
(1 sentences)

Sequence

guuggcuggcagaggaagggaaggguccggggucggcugagcaugcccucaggUUGCUCACUGUUCUUCCCUAGaaugucaggugaugu
((((.((((((.....(((((((((....((((.(.(((((......))))).).))))....)))))))))....)))))).))))..

Structure
--    g      gagga         uccg    c g     ca 
  guug cuggca     agggaaggg    gggu g cugag  u
  |||| ||||||     |||||||||    |||| | |||||   
  uagu gacugu     UCCCUUCUU    CUCG U gacuc  g
ug    g      -aaGA         GUCA    U g     cc 


Annotation confidence Not enough data
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Genome context
chr12: 121913357-121913445 [-]

Database links

Mature ppy-miR-1178

Accession MIMAT0016143
Description Pongo pygmaeus ppy-miR-1178 mature miRNA
Sequence 54 - UUGCUCACUGUUCUUCCCUAG - 74
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64