Stem-loop ppy-mir-1180

Accession

MI0015180

Description

Pongo pygmaeus ppy-mir-1180 precursor miRNA

Gene family

MIPF0000789; mir-1180

Sequence

gcugcuggacccacccggccgggaauagugcuccugguugUUUCCGGCUCGCGUGGGUGUGUcggcggc
((((((((((((((.(((((((((((((..(....).))))))))))).)).))))))...))))))))

Structure

        ---      c  -           ug u 
gcugcugg   acccac cg gccgggaauag  c c
||||||||   |||||| || |||||||||||  |  
cggcggcU   UGGGUG GC CGGCCUUUguu  g c
        GUG      C  U           -g u 

Annotation confidence Not enough data

Genome context

chr17: 19536387-19536455 [-]

Mature ppy-miR-1180

• Accession: MIMAT0016145
• Description: Pongo pygmaeus ppy-miR-1180 mature miRNA
• Sequence: 41 - UUUCCGGCUCGCGUGGGUGUGU - 62
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64