miRBase entry: ppy-mir-1224

Stem-loop ppy-mir-1224


Accession
MI0015193
Description
Pongo pygmaeus ppy-mir-1224 precursor miRNA
Gene family
MIPF0000440; mir-1224


Sequence

GUGAGGACUCGGGAGGUGGaggguggcgccgccggggccgggcgcugucucagcucgcuucuccCCCCACCUCCUCUCUCCUCAG
.((((((...(((((((((.(((.((((..((.(((((.(....).))))).)).))))...))).)))))))))...)))))).

Structure
G      CUC         a   --u    cc  c     c g 
 UGAGGA   GGGAGGUGG ggg   ggcg  gc ggggc g g
 ||||||   ||||||||| |||   ||||  || ||||| |  
 ACUCCU   UCCUCCACC Ccc   ucgc  cg cucug c c
G      CUC         C   ucu    -u  a     u g 


Annotation confidence Not enough data
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Genome context
chr3: 188104214-188104298 [+]

Database links

Mature ppy-miR-1224-5p

Accession MIMAT0016158
Description Pongo pygmaeus ppy-miR-1224-5p mature miRNA
Sequence 1 - GUGAGGACUCGGGAGGUGG - 19
Evidence not_experimental

Mature ppy-miR-1224-3p

Accession MIMAT0016159
Description Pongo pygmaeus ppy-miR-1224-3p mature miRNA
Sequence 65 - CCCCACCUCCUCUCUCCUCAG - 85
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64