miRBase entry: ppy-mir-1225

Stem-loop ppy-mir-1225


Accession
MI0015194
Description
Pongo pygmaeus ppy-mir-1225 precursor miRNA
Gene family
MIPF0000445; mir-1225


Sequence

GUGGGUACGGCCCAGUGGGGGGgagagggacacgcccugggcucugcccagggugcagccggacugacUGAGCCCCUGUGCCGCCCCCAG
.((((..((((.(((.(((((..((..((...((((((((((...))))))))))...))...))..))...)))))).))))..)))).

Structure
G    UA    C   U   ---  Gg  -ag  aca          u 
 UGGG  CGGC CAG GGG   GG  ag   gg   cgcccugggc  
 ||||  |||| ||| |||   ||  ||   ||   |||||||||| c
 ACCC  GCCG GUC CCC   Uc  uc   cc   gugggacccg  
G    CC    U   -   GAG  ag  agg  gac          u 


Annotation confidence Not enough data
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Genome context
chr16: 2162434-2162523 [-]

Database links

Mature ppy-miR-1225-5p

Accession MIMAT0016160
Description Pongo pygmaeus ppy-miR-1225-5p mature miRNA
Sequence 1 - GUGGGUACGGCCCAGUGGGGGG - 22
Evidence not_experimental

Mature ppy-miR-1225-3p

Accession MIMAT0016161
Description Pongo pygmaeus ppy-miR-1225-3p mature miRNA
Sequence 69 - UGAGCCCCUGUGCCGCCCCCAG - 90
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64