Stem-loop ppy-mir-1227

Accession

MI0015196

Description

Pongo pygmaeus ppy-mir-1227 precursor miRNA

Gene family

MIPF0000454; mir-1227

Sequence

guggggccaggcaguggugggcacugcuggggugggcacagcagccaugcagagcaggcaucugaccaCAUGCCACCCUUUUCCCCAG
.(((((...(((((((.....)))))))(((((((.(((((..(((.(((...))))))..)))......)))))))))...))))).

Structure

g     ccaggcaguggugggcacugcu       g  ------   ca   a   a 
 ugggg                      ggggugg ca      cag  gcc ugc  
 |||||                      ||||||| ||      |||  ||| ||| g
 ACCCC                      UCCCACC GU      guc  cgg acg  
G     -------------------UUU       -  ACacca   ua   -   a 

Annotation confidence Not enough data

Genome context

chr19: 2208954-2209041 [-]

Mature ppy-miR-1227

• Accession: MIMAT0016163
• Description: Pongo pygmaeus ppy-miR-1227 mature miRNA
• Sequence: 69 - CAUGCCACCCUUUUCCCCAG - 88
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64