Stem-loop ppy-mir-1236

Accession

MI0015199

Description

Pongo pygmaeus ppy-mir-1236 precursor miRNA

Gene family

MIPF0000689; mir-1236

Sequence

gugagugacaggggaaauggggauggacuggaagugggcagcauggagcugaccuucgucauggcuuggccaacauaaugCCUCUUCCCCUUGUCUCUCCAG
(.(((.((((((((((..((..((((((.(((.((.(((........))).)).)))))).((((...)))).)))....))..)))))).)))).))))..

Structure

-- u   u    -      au  --gg   -------------   u   a  g   agc 
  g gag gaca ggggaa  gg    aug             gac gga gu ggc   a
  | ||| |||| ||||||  ||    |||             ||| ||| || |||    
  C CUC CUGU CCCCUU  CC    uac             cug cuu ca ucg   u
GA -   U    U      CU  guaa   aaccgguucggua   -   c  g   agg 

Annotation confidence Not enough data

Genome context

chr6: 32456874-32456975 [-]

Mature ppy-miR-1236

• Accession: MIMAT0016166
• Description: Pongo pygmaeus ppy-miR-1236 mature miRNA
• Sequence: 81 - CCUCUUCCCCUUGUCUCUCCAG - 102
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64