Stem-loop ppy-mir-1238

Accession

MI0015201

Description

Pongo pygmaeus ppy-mir-1238 precursor miRNA

Gene family

MIPF0000941; mir-1238

Sequence

gugagugggagccccaguguguguuggggcugugacgggugggcagccaggccucugagcCUCCCUCAUCUGUCUGCCCCag
....((.(.((((((((......)))))))).).))((((((((((..((((......)))).......))))))))))...

Structure

gugagugggagccccaguguguguuggggcugugac          -----cc    cu 
                                    gggugggcag       aggc  c
                                    ||||||||||       ||||   
                                    CCCGUCUGUC       UCcg  u
---------------------------------gaC          UACUCCC    ag 

Annotation confidence Not enough data

Genome context

chr19: 10694561-10694642 [+]

Mature ppy-miR-1238

• Accession: MIMAT0016168
• Description: Pongo pygmaeus ppy-miR-1238 mature miRNA
• Sequence: 61 - CUCCCUCAUCUGUCUGCCCC - 80
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64