miRBase entry: ppy-mir-1248

Stem-loop ppy-mir-1248


Accession
MI0015206
Description
Pongo pygmaeus ppy-mir-1248 precursor miRNA
Gene family
MIPF0000622; mir-1248


Sequence

uuuACCUUCUUGUAUAAGCACUGUGCUAAAauugcagacacuaggaccaugucuugguuuuugcaauaaugcuagcagaguacacacaagaagaaaaguaacagca
.....((((((((....(.(((.(((((..((((((((.((((((((...)))))))).)))))))).....))))).))).)..)))))))).............

Structure
--------uuuAC        AUAA C   G     ---AA        c        c 
             CUUCUUGU    G ACU UGCUA     auugcaga acuaggac  
             ||||||||    | ||| |||||     |||||||| |||||||| a
             gaagaaca    c uga acgau     uaacguuu ugguucug  
acgacaaugaaaa        --ca a   g     cguaa        u        u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 190576400-190576505 [+]

Database links

Mature ppy-miR-1248

Accession MIMAT0016173
Description Pongo pygmaeus ppy-miR-1248 mature miRNA
Sequence 4 - ACCUUCUUGUAUAAGCACUGUGCUAAA - 30
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64