miRBase entry: ppy-mir-1253

Stem-loop ppy-mir-1253


Accession
MI0015211
Description
Pongo pygmaeus ppy-mir-1253 precursor miRNA
Gene family
MIPF0000611; mir-1253


Sequence

agcagcaagagguaaaauccaaaAGAGGAGAAGAUCAGCCUGCAgauguggacugcuaaaugcaggcugaucuucuccucuuugggauucucuuaugagaggcca
.((..(((((((....((((.(((((((((((((((((((((((....(((....)))..))))))))))))))))))))))).))))))))))....)..))..

Structure
-a  ag ----      uaaa    a                       gaug   a 
  gc  c    aagagg    aucc aaAGAGGAGAAGAUCAGCCUGCA    ugg c
  ||  |    ||||||    |||| |||||||||||||||||||||||    |||  
  cg  g    uucucu    uagg uuucuccucuucuagucggacgu    auc u
ac  ga agua      ----    g                       --aa   g 


Annotation confidence Not enough data
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Genome context
chr17: 2658644-2658748 [-]

Database links

Mature ppy-miR-1253

Accession MIMAT0016178
Description Pongo pygmaeus ppy-miR-1253 mature miRNA
Sequence 24 - AGAGGAGAAGAUCAGCCUGCA - 44
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64