Stem-loop ppy-mir-1271

Accession

MI0015229

Description

Pongo pygmaeus ppy-mir-1271 precursor miRNA

Gene family

MIPF0000483; mir-1271

Sequence

cacccagaucagugCUUGGCACCUAGCAAGCACUCAguaaauacuuguugagugccugcuaugugccaggcauugugcugagggcu
..(((((..(((((((((((((.(((((.(((((((((((....))))))))))).))))).)))))))))))))..))).))...

Structure

-ca  -   au             C     A           a 
   cc cag  cagugCUUGGCAC UAGCA GCACUCAguaa u
   || |||  ||||||||||||| ||||| |||||||||||  
   gg guc  guuacggaccgug aucgu cgugaguuguu a
ucg  a   gu             u     c           c 

Annotation confidence Not enough data

Genome context

chr5: 179091970-179092055 [+]

Mature ppy-miR-1271

• Accession: MIMAT0016195
• Description: Pongo pygmaeus ppy-miR-1271 mature miRNA
• Sequence: 15 - CUUGGCACCUAGCAAGCACUCA - 36
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64