miRBase entry: ppy-mir-1283a

Stem-loop ppy-mir-1283a


Accession
MI0015238
Description
Pongo pygmaeus ppy-mir-1283a precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

cucaugcugugacUCUACAAAGGAAAGCGCUUUCUguugucagaaugaagagaaagcgcuucccuuuugaggguuacgguuugagaa
((((.(((((((((((..(((((.(((((((((((.((.........)).))))))))))).)))))..))))))))))).))))..

Structure
--    u           AC     A           g  guc 
  cuca gcugugacUCU  AAAGG AAGCGCUUUCU uu   a
  |||| |||||||||||  ||||| ||||||||||| ||   g
  gagu uggcauuggga  uuucc uucgcgaaaga aa   a
aa    u           gu     c           g  gua 


Annotation confidence Not enough data
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Genome context
chr19: 55463738-55463824 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from ppy-mir-1283a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-1283a

Accession MIMAT0016204
Description Pongo pygmaeus ppy-miR-1283a mature miRNA
Sequence 14 - UCUACAAAGGAAAGCGCUUUCU - 35
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64