Stem-loop ppy-mir-1289-1

Accession

MI0015245

Description

Pongo pygmaeus ppy-mir-1289-1 precursor miRNA

Gene family

MIPF0000626; mir-1289

Sequence

uucuuaauuuuuaguaggaauuaaaaacaaaacugguaaaugcagacucuuggauuccacccccagagaauccguaaaccgggggUGGAGUCCAGGAAUCUGCAUUUUagaaaguacccagggugauucugauacauugggaaca
((((((((...((...(((((((........(((...(((((((((.(((((((((((((((((................))))))))))))))))).))))))))).....)))........)))))))..)).))))))))..

Structure

--        uuu  gua       aaaacaaa   --ggu         c                 agagaau 
  uucuuaau   ua   ggaauua        acu     aaaugcaga ucuuggauuccaccccc       c
  ||||||||   ||   |||||||        |||     ||||||||| |||||||||||||||||        
  aaggguua   au   ucuuagu        uga     UUUACGUCU AGGACCUGAGGUggggg       c
ac        --c  -ag       gggaccca   aagaU         A                 ccaaaug 

Annotation confidence Not enough data

Genome context

chr20: 32677897-32678041 [-]

Mature ppy-miR-1289

• Accession: MIMAT0016211
• Description: Pongo pygmaeus ppy-miR-1289 mature miRNA
• Sequence: 86 - UGGAGUCCAGGAAUCUGCAUUUU - 108
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64