Stem-loop ppy-mir-1827

Accession

MI0015274

Description

Pongo pygmaeus ppy-mir-1827 precursor miRNA

Gene family

MIPF0000646; mir-1827

Sequence

ucagcagcacagccuucggccuaaagcaaugagaagccucugaaaggcUGAGGCAGUAGAUUGAAU
((((....((.((((.((((((....((..(((....)))))..)))))))))).))...))))..

Structure

--    cagc  a    u      aaag  au   a 
  ucag    ac gccu cggccu    ca  gag a
  ||||    || |||| ||||||    ||  |||  
  AGUU    UG CGGA GUcgga    gu  cuc g
UA    -AGA  A    -      --aa  --   c 

Annotation confidence Not enough data

Genome context

chr12: 101488222-101488287 [+]

Mature ppy-miR-1827

• Accession: MIMAT0016236
• Description: Pongo pygmaeus ppy-miR-1827 mature miRNA
• Sequence: 49 - UGAGGCAGUAGAUUGAAU - 66
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64