miRBase entry: ppy-mir-1914

Stem-loop ppy-mir-1914


Accession
MI0015280
Description
Pongo pygmaeus ppy-mir-1914 precursor miRNA
Gene family
MIPF0001040; mir-1914


Sequence

cgugugagcccgCCCUGUGCCCGUCCCACUUCUGcugcugcuuagcucaggaggggucccgcacugggaggggcccucac
.(((.(.((((.(((.((((..(.(((.((((((..(((....))).))))))))).)..)))).)))..)))).).)))

Structure
c   u a    -g   U    CC U   A      cu   g 
 gug g gccc  CCC GUGC  G CCC CUUCUG  gcu c
 ||| | ||||  ||| ||||  | ||| ||||||  |||  
 cac c cggg  ggg cacg  c ggg gaggac  cga u
-   u c    ga   u    cc u   -      -u   u 


Annotation confidence Not enough data
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Genome context
chr20: 62381460-62381539 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-1914
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-1914

Accession MIMAT0016242
Description Pongo pygmaeus ppy-miR-1914 mature miRNA
Sequence 13 - CCCUGUGCCCGUCCCACUUCUG - 34
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64