miRBase entry: sja-mir-3481

Stem-loop sja-mir-3481


Accession
MI0015304
Description
Schistosoma japonicum sja-mir-3481 precursor miRNA


Sequence

gauguaacuuUUCUUUACAGUGGGUCUCUUUguguucuuuugcgauggcauuugaugcaaaGGUGAUCUUUGUAUGGACAAauuuuuaugg
...........(((.(((((.(((((((((((((((....(((....)))...)))))))))).)))))))))).))).............

Structure
--gauguaacuuU   U     U     -          cuuu   g 
             UCU UACAG GGGUC UCUUUguguu    ugc a
             ||| ||||| ||||| ||||||||||    |||  
             AGG AUGUU UCUAG GGaaacguag    acg u
gguauuuuuaAAC   U     -     U          -uuu   g 


Annotation confidence Not enough data
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Genome context
CABF01019045.1: 21887-21977 [-]

Database links

Mature sja-miR-3481-5p

Accession MIMAT0016282
Description Schistosoma japonicum sja-miR-3481-5p mature miRNA
Sequence 11 - UUCUUUACAGUGGGUCUCUUU - 31
Evidence experimental
Illumina [1]

Mature sja-miR-3481-3p

Accession MIMAT0016283
Description Schistosoma japonicum sja-miR-3481-3p mature miRNA
Sequence 62 - GGUGAUCUUUGUAUGGACAA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20161724
    An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
    Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
    PLoS Negl Trop Dis (2010) 4:e596