Stem-loop sja-mir-3492

Accession

MI0015316

Description

Schistosoma japonicum sja-mir-3492 precursor miRNA

Gene family

MIPF0001622; mir-3492

Literature search

1 open access papers mention sja-mir-3492
(1 sentences)

Sequence

agcuuccuguAUCCGUGCUGAGAUUUCGUCUgucaccaggccaccagcacugaugagacuccacagauacgugaagcg
.(((((.((((((.(((..(((.(((((((.((...(.((...)).).)).))))))))))))).)))))).))))).

Structure

a     c      C   CU   A       U  cac a  c 
 gcuuc uguAUC GUG  GAG UUUCGUC gu   c gg  
 ||||| |||||| |||  ||| ||||||| ||   | || c
 cgaag gcauag cac  cuc agaguag ca   g cc  
g     u      a   --   -       u  --c a  a 

Annotation confidence Not enough data

Genome context

CABF01040935.1: 666-743 [+]

Mature sja-miR-3492

• Accession: MIMAT0016301
• Description: Schistosoma japonicum sja-miR-3492 mature miRNA
• Sequence: 11 - AUCCGUGCUGAGAUUUCGUCU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596