Stem-loop sja-mir-3496

Accession

MI0015320

Description

Schistosoma japonicum sja-mir-3496 precursor miRNA

Sequence

cuacagcacaCGGCGUCUGGACGUUUGGUUUUuaguugcacuacuuacgcaaagugugcugaauguacggaaaucguucgugaugcaccgg
.....((((((((((((((.(((((((((......((((.........)))).....))))))))).))))...)).))))).))).....

Structure

cuaca   -     -  ---    G         UUUuag    acu 
     gca caCGG CG   UCUG ACGUUUGGU      uugc   a
     ||| ||||| ||   |||| |||||||||      ||||   c
     cgu gugcu gc   aggc uguaagucg      aacg   u
ggcca   a     u  uaa    a         -uguga    cau 

Annotation confidence Not enough data

Genome context

CABF01008096.1: 24831-24921 [-]

Mature sja-miR-3496

• Accession: MIMAT0016305
• Description: Schistosoma japonicum sja-miR-3496 mature miRNA
• Sequence: 11 - CGGCGUCUGGACGUUUGGUUUU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596