miRBase entry: ahy-MIR156a

Stem-loop ahy-MIR156a


Accession
MI0015332
Description
Arachis hypogaea ahy-MIR156a precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
5 open access papers mention ahy-MIR156a
(44 sentences)

Sequence

gaagagauuauaaauguUGACAGAAGAGAGAGAGCACaacccgagaaauggucaaagaaucuuuuaccuuuguugggagugugcucucuacucuucugucaucaucuuuaucuuua
..((((((.....(((.(((((((((((((((((((((.(((((.(((.(((.((((...)))).)))))).)))))..)))))))))).))))))))))).)))....)))))).

Structure
ga      uauaa   u           -          -a     g   u   c    a 
  agagau     aug UGACAGAAGAG AGAGAGCACa  cccga aaa ggu aaag  
  ||||||     ||| ||||||||||| ||||||||||  ||||| ||| ||| |||| a
  uuucua     uac acugucuucuc ucucucgugu  ggguu uuu cca uuuc  
-a      -uuuc   u           a          ga     g   -   u    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ahy-miR156a

Accession MIMAT0016317
Description Arachis hypogaea ahy-miR156a mature miRNA
Sequence 18 - UGACAGAAGAGAGAGAGCAC - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20047695
    Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
    Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
    BMC Plant Biol (2010) 10:3