miRBase entry: ahy-MIR160

Stem-loop ahy-MIR160


Accession
MI0015336
Description
Arachis hypogaea ahy-MIR160 precursor miRNA
Gene family
MIPF0000032; MIR160

Literature search
2 open access papers mention ahy-MIR160
(4 sentences)

Sequence

aaauauucgaauuaugugucUGCCUGGCUCCCUGAAUGCCAuguaaguuaguuuguuaagaaaagauuaacaaacgucuuauaugGCAUGAAGGGAGUCACGCAGGcgauucauuuugaaacauau
.....((((((.....(((((((.(((((((((..((((((((((((...(((((((((.......)))))))))..))))))))))))..))))))))).)))))))......))))))......

Structure
-aaaua      -uuaug       C         GA            uua         ga 
      uucgaa      ugucUGC UGGCUCCCU  AUGCCAuguaag   guuuguuaa  a
      ||||||      ||||||| |||||||||  ||||||||||||   |||||||||  a
      aaguuu      gcGGACG ACUGAGGGA  UACGguauauuc   caaacaauu  a
uauaca      uacuua       C         AG            -ug         ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ahy-miR160-5p

Accession MIMAT0016322
Description Arachis hypogaea ahy-miR160-5p mature miRNA
Sequence 21 - UGCCUGGCUCCCUGAAUGCCA - 41
Evidence experimental
Illumina [1]

Mature ahy-miR160-3p

Accession MIMAT0016323
Description Arachis hypogaea ahy-miR160-3p mature miRNA
Sequence 86 - GCAUGAAGGGAGUCACGCAGG - 106
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20047695
    Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
    Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
    BMC Plant Biol (2010) 10:3