Stem-loop ahy-MIR398

Accession

MI0015339

Description

Arachis hypogaea ahy-MIR398 precursor miRNA

Gene family

MIPF0000107; MIR398

Literature search

2 open access papers mention ahy-MIR398
(2 sentences)

Sequence

uaucucagaggagugaaccugagaacacaaaguaaauuguuucggaguuuggaaugccauaaucacaugcauaaugcauuuaugcuuaugcuuguauaugguacauauuuucgaauuuuaauuuaccuUGUGUUCUCAGGUCACCCCUuugag
...((((((((.((((.(((((((((((((.((((((((.(((((((.(..(..(((((((...(((.((((((.(((....))))))))).))).))))))))..).)))))))...)))))))).))))))))))))))))).))))))))

Structure

uau        a    a             a        --u       u ug aa       auc   u      u   u 
   cucagagg guga ccugagaacacaa guaaauug   uucggag u  g  ugccaua   aca gcauaa gca u
   |||||||| |||| ||||||||||||| ||||||||   ||||||| |  |  |||||||   ||| |||||| |||  
   gaguuUCC CACU GGACUCUUGUGUu cauuuaau   aagcuuu a  c  augguau   ugu cguauu cgu u
---        C    -             c        uuu       u ua --       --a   u      -   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ahy-miR398

• Accession: MIMAT0016327
• Description: Arachis hypogaea ahy-miR398 mature miRNA
• Sequence: 129 - UGUGUUCUCAGGUCACCCCU - 148
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20047695
   Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
   Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
   BMC Plant Biol (2010) 10:3