miRBase entry: ahy-MIR3509

Stem-loop ahy-MIR3509


Accession
MI0015342
Description
Arachis hypogaea ahy-MIR3509 precursor miRNA

Literature search
1 open access papers mention ahy-MIR3509
(2 sentences)

Sequence

ucgacuucacguugaaguugaAUACUUGAGAGCCGUUAGAUGAuuugauugauuugacuaaauuuucAUCUAACGACUCUCAGAUAUCAacuucacgugaagucaacuucaccugaguuuucaccuuaauacaaaaauagaauuag
..((((((((((.((((((((.((.(((((((.((((((((((...((((..........)))).)))))))))).))))))).))))))))))))))))))))(((((.....)))))...........................

Structure
----------------------------------------uc          u        A  C       C          uuu    gauu 
                                          gacuucacgu gaaguuga UA UUGAGAG CGUUAGAUGA   gauu    u
                                          |||||||||| |||||||| || ||||||| ||||||||||   ||||     
                                          cugaagugca cuucaACU AU GACUCUC GCAAUCUAcu   uuaa    g
gauuaagauaaaaacauaauuccacuuuugaguccacuucaa          -        -  A       A          --u    auca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ahy-miR3509-5p

Accession MIMAT0016331
Description Arachis hypogaea ahy-miR3509-5p mature miRNA
Sequence 22 - AUACUUGAGAGCCGUUAGAUGA - 43
Evidence experimental
Illumina [1]

Mature ahy-miR3509-3p

Accession MIMAT0016332
Description Arachis hypogaea ahy-miR3509-3p mature miRNA
Sequence 68 - AUCUAACGACUCUCAGAUAUCA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20047695
    Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
    Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
    BMC Plant Biol (2010) 10:3