miRBase entry: ahy-MIR3520

Stem-loop ahy-MIR3520


Accession
MI0015353
Description
Arachis hypogaea ahy-MIR3520 precursor miRNA

Literature search
1 open access papers mention ahy-MIR3520
(1 sentences)

Sequence

gaccuggguccucuauuuauAGGUGAUGGUGAAUAUCUUAUCuuaucuuauuugguuaagauAAGGGAGACGUUUGAAUUAUCcuauggagacauuunaauucgaaaguugguua
((((...(((.....((((((((((((..(((((.((((.((((((((((......)))))))))))))).))))).)))).))))))))))).................)))).

Structure
-    --------------ugg   cucua        -    GG     A    A          uu 
 gacc                 guc     uuuauAGG UGAU  UGAAU UCUU UCuuaucuua  u
 ||||                 |||     |||||||| ||||  ||||| |||| ||||||||||   
 uugg                 cag     agguaucC AUUA  GUUUG AGAG GGAAuagaau  g
a    uugaaagcuuaanuuua   -----        U    -A     C    -          ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ahy-miR3520-5p

Accession MIMAT0016346
Description Arachis hypogaea ahy-miR3520-5p mature miRNA
Sequence 21 - AGGUGAUGGUGAAUAUCUUAUC - 42
Evidence experimental
Illumina [1]

Mature ahy-miR3520-3p

Accession MIMAT0016347
Description Arachis hypogaea ahy-miR3520-3p mature miRNA
Sequence 63 - AAGGGAGACGUUUGAAUUAUC - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20047695
    Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)
    Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ
    BMC Plant Biol (2010) 10:3