Stem-loop sequence rno-mir-3575

AccessionMI0015447 (change log)
DescriptionRattus norvegicus miR-3575 stem-loop
Gene family MIPF0000019; mir-8
Stem-loop
   uggacgccgaugacacag   c       uc a  a            auuagagacuccc 
5'                   ggg aggggcc  c uc uuacccggcagu             a
                     ||| |||||||  | || ||||||||||||              
3'                   ccc uccccgg  g ag aaugggucguca             a
   --------accugaccaa   a       ga c  -            caaacccacgacc 
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Deep sequencing
4 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr4: 157236759-157236873 [+]
intergenic
Clustered miRNAs
< 10kb from rno-mir-3575
rno-mir-141chr4: 157236346-157236439 [-]
rno-mir-3575chr4: 157236759-157236873 [+]
rno-mir-200cchr4: 157236786-157236854 [-]
Database links

Mature sequence rno-miR-3575

Accession MIMAT0017861
Sequence

77 - 

acugcuggguaagacgag

 - 94

Get sequence
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).