Stem-loop rno-mir-3596a

Accession

MI0015465

Description

Rattus norvegicus rno-mir-3596a precursor miRNA

Literature search

1 open access papers mention rno-mir-3596a
(1 sentences)

Sequence

guugcuuugugcaagucccaaggaaagcuaggaggcuguacaguuaucucccuuguuguaacucuaAACUAUACAACCUACUACCUCAgccugggagcaugccgucacaguggc
((((((.((.(((.((((((.((..((.(((.(((.((((.((((.....................)))).)))).))).))).))...))))))).).)))...)).))))))

Structure

      u  --u   a -     a  -aa  c   g   c    c    aucucccuu 
guugcu ug   gca g uccca gg   ag uag agg ugua aguu         g
|||||| ||   ||| | ||||| ||   || ||| ||| |||| ||||         u
cgguga ac   cgu c agggu cc   UC AUC UCC ACAU UCAA         u
      c  ugc   a g     -  gAC  C   A   A    A    aucucaaug 

Annotation confidence Not enough data

Genome context

chr8: 45753254-45753367 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from rno-mir-3596a

Mature rno-miR-3596a

• Accession: MIMAT0017886
• Description: Rattus norvegicus rno-miR-3596a mature miRNA
• Sequence: 67 - AACUAUACAACCUACUACCUCA - 88
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249