Accession
MI0015504
Description
Ciona intestinalis
cin-mir-4000a-2 precursor miRNA
Gene family
MIPF0000867;
mir-4000
Sequence
18496
reads,
5811
reads per million, 2 experiments
CGAAACUUGCGUGGAACAGGcuguuugaauccaGCCUUUUCGUGUAAAUUUCCAU
.((((.((((((((((.((((((........)))))))))))))))).))))...
.((((.((((((((((.((((((........)))))))))))))))).))))...
Structure
--C C C uuu GAAA UUGCGUGGAA AGGcug g |||| |||||||||| |||||| CUUU AAUGUGCUUU UCCGac a UAC A - cua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
7q: 5410807-5410861 [-]
Clustered miRNAs
21 other miRNAs are < 10 kb from cin-mir-4000a-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4000a-2-3p
| Accession | MIMAT0026471 |
| Description | Ciona intestinalis cin-miR-4000a-2-3p mature miRNA |
| Sequence | 34 - GCCUUUUCGUGUAAAUUUCCAU - 55 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4000a-5p
| Accession | MIMAT0016430 |
| Description | Ciona intestinalis cin-miR-4000a-5p mature miRNA |
| Sequence | 1 - CGAAACUUGCGUGGAACAGG - 20 |
| Evidence |
References
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