miRBase entry: cin-mir-4013b

Stem-loop cin-mir-4013b


Accession
MI0015558
Description
Ciona intestinalis cin-mir-4013b precursor miRNA


Sequence

3 reads, 2 reads per million, 1 experiments
UUACUUGCUUUAACAGUAUGcguuauuaucgUAGGCUGCUAAUGCAAGC
...(((((.(((.((((.((((.......)))).)))).))).))))).

Structure
UUA     U   A    A    uu 
   CUUGC UUA CAGU UGcg  a
   ||||| ||| |||| ||||  u
   GAACG AAU GUCG AUgc  u
--C     U   C    G    ua 


Annotation confidence Not enough data
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Genome context
scaffold_44: 799727-799775 [+]

Database links

Mature cin-miR-4013b-5p

Accession MIMAT0016516
Description Ciona intestinalis cin-miR-4013b-5p mature miRNA
Sequence 1 - UUACUUGCUUUAACAGUAUG - 20
Evidence experimental
Illumina [1]

Mature cin-miR-4013b-3p

Accession MIMAT0016517
Description Ciona intestinalis cin-miR-4013b-3p mature miRNA
Sequence 32 - UAGGCUGCUAAUGCAAGC - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39