miRBase entry: cin-mir-4107

Stem-loop cin-mir-4107


Accession
MI0015661
Description
Ciona intestinalis cin-mir-4107 precursor miRNA


Sequence

AUAUCUAAUUGAUUGUUGGuauuauaaaguauuuaagaugauacauaccauguaacaccaugcugcaacgugaugu
(((((...(((.....((((.(((((..((((.((......)).))))..))))).)))).....)))...)))))

Structure
     UAA   AUUGU    a     aa    u  ag 
AUAUC   UUG     UGGu uuaua  guau ua  a
|||||   |||     |||| |||||  |||| ||   
uguag   aac     acca aaugu  caua au  u
     ugc   gucgu    c     ac    c  ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cin-miR-4107-5p

Accession MIMAT0016694
Description Ciona intestinalis cin-miR-4107-5p mature miRNA
Sequence 1 - AUAUCUAAUUGAUUGUUGG - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39