Stem-loop cin-mir-4130

Accession

MI0015685

Description

Ciona intestinalis cin-mir-4130 precursor miRNA

Sequence

11 reads, 5 reads per million, 2 experiments

ucaagacacagcuguagaacuagauaacugugacguaaCAGACAGCUGCGUGUCGUAA
....(((((((((((............((((......))))))))))..)))))....

Structure

ucaa     --      agaacuagauaa    ga 
    gacac  agcugu            cugu  c
    |||||  ||||||            ||||   
    CUGUG  UCGACA            GACa  g
AAUG     CG      ------------    au 

Annotation confidence Not enough data

Genome context

9p: 114607-114664 [-]

Mature cin-miR-4130-3p

• Accession: MIMAT0016725
• Description: Ciona intestinalis cin-miR-4130-3p mature miRNA
• Sequence: 39 - CAGACAGCUGCGUGUCGUAA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39