miRBase entry: cin-mir-4135

Stem-loop cin-mir-4135


Accession
MI0015690
Description
Ciona intestinalis cin-mir-4135 precursor miRNA


Sequence

1 reads, 1 reads per million, 1 experiments
cuaccuauuuaacugauacaucaauaagucaugauGCCAUGUUGAUUUGGUGGCU
(((((...(((((((...(((((........))))).)).)))))...)))))..

Structure
--     uau     -  aua     aua 
  cuacc   uuaac ug   cauca   a
  |||||   ||||| ||   |||||    
  GGUGG   AGUUG AC   Guagu   g
UC     UUU     U  --C     acu 


Annotation confidence Not enough data
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Genome context
2q: 3205448-3205502 [+]

Database links

Mature cin-miR-4135-3p

Accession MIMAT0016732
Description Ciona intestinalis cin-miR-4135-3p mature miRNA
Sequence 36 - GCCAUGUUGAUUUGGUGGCU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39