miRBase entry: cin-mir-4175

Stem-loop cin-mir-4175


Accession
MI0015730
Description
Ciona intestinalis cin-mir-4175 precursor miRNA


Sequence

4 reads, 4 reads per million, 1 experiments
uaccacuggauggcgauaguaggugauGGUGUAGCUCCGAUGGUAG
(((((.((((..((.(((.((.....)).))).)))))).))))).

Structure
-     c    ug  g   g  g 
 uacca ugga  gc aua ua g
 ||||| ||||  || ||| || u
 AUGGU GCCU  CG UGU Gu g
G     A    --  A   G  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cin-miR-4175-3p

Accession MIMAT0016784
Description Ciona intestinalis cin-miR-4175-3p mature miRNA
Sequence 28 - GGUGUAGCUCCGAUGGUAG - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39