Stem-loop sequence cin-mir-4182

Accession MI0015738
Description Ciona intestinalis miR-4182 stem-loop
Stem-loop 
   aa  g         -       cc 
cau  ug agguuuuuu acuagug  a
|||  || ||||||||| |||||||  a
gua  ac ucuaaaaaa uggucau  a
   ag  g         c       aa
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Genome context
Coordinates (JGI2) Overlapping transcripts
10p: 898374-898429 [+]
sense
ENSCINT00000027030 ; F6Y6Y3_CIOIN; intron 2
ENSCINT00000027031 ; F6Y6X7_CIOIN; intron 3
Database links

Mature sequence cin-miR-4182-5p

Accession MIMAT0016796
Sequence

1 -  

cauaauggagguuuuuuacu

 - 20

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Evidence experimental; Solexa [1]

Mature sequence cin-miR-4182-3p

Accession MIMAT0016797
Sequence

38 -  

ucaaaaaaucugcagaaug

 - 56

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Evidence experimental; Solexa [1]

References

1
PMID:20370911 "miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data" Hendrix D, Levine M, Shi W Genome Biol. 11:R39(2010).