Stem-loop sequence cin-mir-4185

Accession MI0015742
Description Ciona intestinalis miR-4185 stem-loop
Stem-loop 
-----   -     a   ua    cug      -   ua 
     cag cggug uga  auac   gacgug auu  u
     ||| ||||| |||  ||||   |||||| |||   
     guc gucau acu  uaug   uuguac uag  a
gucga   u     -   --    ---      g   ua
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Genome context
Coordinates (JGI2) Overlapping transcripts
9q: 3199937-3200003 [+]
intergenic
Database links

Mature sequence cin-miR-4185-5p

Accession MIMAT0016802
Sequence

1 -  

cagcggugaugauaauac

 - 18

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Evidence experimental; Solexa [1]

Mature sequence cin-miR-4185-3p

Accession MIMAT0016803
Sequence

46 -  

uguauucauacugucugagcug

 - 67

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Evidence experimental; Solexa [1]

References

1
PMID:20370911 "miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data" Hendrix D, Levine M, Shi W Genome Biol. 11:R39(2010).