miRBase entry: cin-mir-4186

Stem-loop cin-mir-4186


Accession
MI0015743
Description
Ciona intestinalis cin-mir-4186 precursor miRNA


Sequence

12 reads, 6 reads per million, 2 experiments
CUAGAUGAGGCAAGAGUGAGuguuauuacaaaaguggucuuuaaauaacacucccacuugucuaaucuaa
.(((((.(((((((.(.((((((((((...((((....)))).)))))))))).).))))))).))))).

Structure
C     G       A U          aca    u 
 UAGAU AGGCAAG G GAGuguuauu   aaag g
 ||||| ||||||| | ||||||||||   ||||  
 aucua ucuguuc c cucacaauaa   uuuc g
a     a       a c          --a    u 


Annotation confidence Not enough data
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Genome context
8q: 4071088-4071157 [-]

Database links

Mature cin-miR-4186-5p

Accession MIMAT0016804
Description Ciona intestinalis cin-miR-4186-5p mature miRNA
Sequence 1 - CUAGAUGAGGCAAGAGUGAG - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39