miRBase entry: cin-mir-4203

Stem-loop cin-mir-4203


Accession
MI0015760
Description
Ciona intestinalis cin-mir-4203 precursor miRNA


Sequence

3 reads, 1 reads per million, 2 experiments
uuuaaguucuacagcagugguucuuaaacuuucugggguuuUAAACAAUGCUUGGAUCUUGG
..((((.((((.((((...(((...((((((....))))))..)))..)))))))).)))).

Structure
uu    u    c    gug   cuu      u 
  uaag ucua agca   guu   aaacuu c
  |||| |||| ||||   |||   ||||||  
  GUUC AGGU UCGU   CAA   uuuggg u
-G    U    -    -AA   -AU      g 


Annotation confidence Not enough data
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Genome context
1q: 5581142-5581203 [-]

Database links

Mature cin-miR-4203-3p

Accession MIMAT0016823
Description Ciona intestinalis cin-miR-4203-3p mature miRNA
Sequence 42 - UAAACAAUGCUUGGAUCUUGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39