miRBase entry: cin-mir-4204

Stem-loop cin-mir-4204


Accession
MI0015761
Description
Ciona intestinalis cin-mir-4204 precursor miRNA


Sequence

1 reads, 1 reads per million, 1 experiments
UAAAUAUAAUGUCAUUUAUACAUuauuuaugcaaUAAAUGAUUUAUAUUUACAG
(((((((((.(((((((((.(((.....)))..))))))))))))))))))...

Structure
---         U         -A   u 
   UAAAUAUAA GUCAUUUAU  CAU a
   ||||||||| |||||||||  ||| u
   AUUUAUAUU UAGUAAAUa  gua u
GAC         -         ac   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cin-miR-4204-5p

Accession MIMAT0016824
Description Ciona intestinalis cin-miR-4204-5p mature miRNA
Sequence 1 - UAAAUAUAAUGUCAUUUAUACAU - 23
Evidence experimental
Illumina [1]

Mature cin-miR-4204-3p

Accession MIMAT0016825
Description Ciona intestinalis cin-miR-4204-3p mature miRNA
Sequence 35 - UAAAUGAUUUAUAUUUACAG - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39