miRBase entry: cin-mir-4206

Stem-loop cin-mir-4206


Accession
MI0015763
Description
Ciona intestinalis cin-mir-4206 precursor miRNA


Sequence

2 reads, 2 reads per million, 1 experiments
ccuaggcuacgcauuuaaugaguaaauuuauucuuuuacuauAUUGAAUAGUUUAGUGAG
.((((((((....(((((((((((((........)))))).)))))))))))))))....

Structure
---c        cgca       -      uuu 
    cuaggcua    uuuaaug aguaaa   a
    ||||||||    ||||||| ||||||    
    GAUUUGAU    AAGUUAu ucauuu   u
GAGU        ----       a      ucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_543: 36648-36707 [-]

Database links

Mature cin-miR-4206-3p

Accession MIMAT0016827
Description Ciona intestinalis cin-miR-4206-3p mature miRNA
Sequence 43 - AUUGAAUAGUUUAGUGAG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39