Stem-loop sequence cin-mir-4213

Accession MI0015770
Description Ciona intestinalis miR-4213 stem-loop
Stem-loop 
         aac   uu   c 
aauauuuuu   gau  ucu u
|||||||||   |||  ||| u
uugugaaga   cua  gga u
         -aa   -c   c
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Genome context
Coordinates (JGI2) Overlapping transcripts
14p: 1282153-1282195 [-]
sense
ENSCINT00000028282 ; F6W6C4_CIOIN; intron 3
ENSCINT00000028283 ; F6W6B8_CIOIN; intron 4
scaffold_522: 4816-4858 [+]
sense
ENSCINT00000028282 ; F6W6C4_CIOIN; intron 3
ENSCINT00000028283 ; F6W6B8_CIOIN; intron 4
Database links

Mature sequence cin-miR-4213-5p

Accession MIMAT0016834
Sequence

1 -  

aauauuuuuaacgauuuuc

 - 19

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Evidence experimental; Solexa [1]

References

1
PMID:20370911 "miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data" Hendrix D, Levine M, Shi W Genome Biol. 11:R39(2010).