Stem-loop cin-mir-4217

Accession

MI0015774

Description

Ciona intestinalis cin-mir-4217 precursor miRNA

Sequence

reads, None reads per million, experiments

aauaggaauaaaauacuguaucuguuacuucugcugguaaacUAAUCUUUGUAAUCCUGUU
((((((((((((.....((.....(((((......))))))).....)))))..)))))))

Structure

       --     auacu  aucug     uc 
aauagga  auaaa     gu     uuacu  u
|||||||  |||||     ||     |||||   
UUGUCCU  UGUUU     ca     aaugg  g
       AA     CUAAU  -----     uc 

Annotation confidence Not enough data

Genome context

1q: 2475781-2475841 [+]

Mature cin-miR-4217-3p

• Accession: MIMAT0016839
• Description: Ciona intestinalis cin-miR-4217-3p mature miRNA
• Sequence: 43 - UAAUCUUUGUAAUCCUGUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39