miRBase entry: ssc-mir-383

Stem-loop ssc-mir-383


Accession
MI0015927
Description
Sus scrofa ssc-mir-383 precursor miRNA
Gene family
MIPF0000137; mir-383


Sequence

1 reads, 4 reads per million, 1 experiments
ccugcuccucagaucagaaggugauuguggcuuuggguagauauuaaucagCCACAGCACUGCCUGGUCAGAaagagcaagu
..(((((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..)))))...

Structure
-cc     -c  a      aa    a        uug   aga 
   ugcuc  uc gaucag  ggug uuguggcu   ggu   u
   |||||  || ||||||  |||| ||||||||   |||    
   acgag  AG CUGGUC  UCAC GACACCga   cua   a
uga     aa  A      CG    -        ---   auu 


Annotation confidence Not enough data
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Genome context
chr17: 2603744-2603825 [-]

Database links

Mature ssc-miR-383

Accession MIMAT0017972
Description Sus scrofa ssc-miR-383 mature miRNA
Sequence 52 - CCACAGCACUGCCUGGUCAGA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20433717
    Deciphering the porcine intestinal microRNA transcriptome
    Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
    BMC Genomics (2010) 11:275