miRBase entry: bta-mir-3578

Stem-loop bta-mir-3578


Accession
MI0015945
Description
Bos taurus bta-mir-3578 precursor miRNA
Gene family
MIPF0001166; mir-3578


Sequence

reads, None reads per million, experiments
uuugguacugaaaaaaguguuguccgugaaugauucgucauaaguaaagcGAAUCCACCACGAACAACUUCucuucaaguaccaca
..((((((((((...((.(((((.((((...(((((((..........)))))))...)))).)))))..)).))).)))))))..

Structure
uu       -   aaa  -u     c    aau       caua 
  ugguacu gaa   ag  guugu cgug   gauucgu    a
  ||||||| |||   ||  ||||| ||||   |||||||     
  accauga cuu   uC  CAACA GCAC   CUAAGcg    g
ac       a   --c  UU     A    CAC       aaau 


Annotation confidence Not enough data
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Genome context
chr21: 67871246-67871331 [-]
Clustered miRNAs
18 other miRNAs are < 10 kb from bta-mir-3578
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-3578

Accession MIMAT0016934
Description Bos taurus bta-miR-3578 mature miRNA
Sequence 51 - GAAUCCACCACGAACAACUUC - 71
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19765282
    Identification and characterization of miRNAs expressed in the bovine ovary
    Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D
    BMC Genomics (2009) 10:443