Stem-loop sequence hsa-mir-3605

Accession MI0015995
Description Homo sapiens miR-3605 stem-loop
Gene family MIPF0001639; mir-3605
Stem-loop 
acuuuauac    aauugugau        a     a   a    cucccac 
         gugu         gaggaugg uagca gga gccg       c
         ||||         |||||||| ||||| ||| ||||       u
         cgca         cuccuguc auugu ccu cggc       g
------gcu    -ggguggau        c     g   c    acuccca
Get sequence
Deep sequencing
190 reads, 17 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr1: 33797994-33798093 [-]
sense
OTTHUMT00000011897 ; PHC2-003; exon 3
OTTHUMT00000011898 ; PHC2-004; exon 3
OTTHUMT00000011899 ; PHC2-005; exon 3
OTTHUMT00000011900 ; PHC2-006; exon 3
OTTHUMT00000011902 ; PHC2-008; exon 3
OTTHUMT00000011897 ; PHC2-003; exon 3
OTTHUMT00000011898 ; PHC2-004; exon 3
OTTHUMT00000011899 ; PHC2-005; exon 3
OTTHUMT00000011900 ; PHC2-006; exon 3
OTTHUMT00000011902 ; PHC2-008; exon 3
OTTHUMT00000011896 ; PHC2-002; exon 4
OTTHUMT00000011901 ; PHC2-007; exon 4
OTTHUMT00000011896 ; PHC2-002; exon 4
OTTHUMT00000011901 ; PHC2-007; exon 4
OTTHUMT00000011895 ; PHC2-001; exon 10
OTTHUMT00000011895 ; PHC2-001; exon 10
ENST00000373418 ; PHC2-003; exon 3
ENST00000485928 ; PHC2-004; exon 3
ENST00000467894 ; PHC2-006; exon 3
ENST00000486897 ; PHC2-005; exon 3
ENST00000473158 ; PHC2-008; exon 3
ENST00000373418 ; PHC2-003; exon 3
ENST00000485928 ; PHC2-004; exon 3
ENST00000467894 ; PHC2-006; exon 3
ENST00000486897 ; PHC2-005; exon 3
ENST00000473158 ; PHC2-008; exon 3
ENST00000373422 ; PHC2-002; exon 4
ENST00000493483 ; PHC2-007; exon 4
ENST00000373422 ; PHC2-002; exon 4
ENST00000493483 ; PHC2-007; exon 4
ENST00000431992 ; PHC2-204; exon 9
ENST00000431992 ; PHC2-203; exon 9
ENST00000257118 ; PHC2-001; exon 10
ENST00000373416 ; PHC2-202; exon 10
ENST00000257118 ; PHC2-001; exon 10
ENST00000373416 ; PHC2-201; exon 10
ENST00000419414 ; PHC2-203; exon 11
ENST00000307890 ; PHC2-201; exon 11
ENST00000419414 ; PHC2-202; exon 11
Database links

Mature sequence hsa-miR-3605-5p

Accession MIMAT0017981
Sequence

22 -  

ugaggauggauagcaaggaagcc

 - 44

Get sequence
Deep sequencing 187 reads, 15 experiments
Evidence experimental; Solexa [2]
Predicted targets

Mature sequence hsa-miR-3605-3p

Accession MIMAT0017982
Sequence

66 -  

ccuccguguuaccuguccucuag

 - 88

Get sequence
Deep sequencing 2 reads, 2 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).
2
PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).