Stem-loop hsa-mir-3617

Accession

MI0016007

Symbol

HGNC: MIR3617

Description

Homo sapiens hsa-mir-3617 precursor miRNA

Gene family

MIPF0001477; mir-3617

Literature search

1 open access papers mention hsa-mir-3617
(6 sentences)

Sequence

96 reads, 13 reads per million, 47 experiments

aggucauagAAAGACAUAGUUGCAAGAUGGGauuagaaaccauaugucuCAUCAGCACCCUAUGUCCUUUCUcugcccu
(((.((.((((((((((((.(((..((((((((............)))))))).)))..)))))).)))))).)).)))

Structure

   u  u      -      -U   AA        uagaa 
agg ca agAAAG ACAUAG  UGC  GAUGGGau     a
||| || |||||| ||||||  |||  ||||||||      
ucc gu UCUUUC UGUAUC  ACG  CUACucug     c
   c  c      C      CC   -A        uauac 

Annotation confidence High

Genome context

chr20: 45705102-45705180 [-]

Mature hsa-miR-3617-5p

• Accession: MIMAT0017997
• Description: Homo sapiens hsa-miR-3617-5p mature miRNA
• Sequence: 10 - AAAGACAUAGUUGCAAGAUGGG - 31
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3617-3p

• Accession: MIMAT0022966
• Description: Homo sapiens hsa-miR-3617-3p mature miRNA
• Sequence: 50 - CAUCAGCACCCUAUGUCCUUUCU - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20459774
   Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
   Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
   BMC Biol (2010) 8:58


2. PubMed ID: 21807764
   Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome
   "Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM"
   "Hum Mol Genet (2011) 20:4025-4040