Stem-loop sequence hsa-mir-3618

Accession MI0016008
Description Homo sapiens miR-3618 stem-loop
Stem-loop 
       ag        ga   c  a    ug       gguu 
uaagcug  ugcauugu  uuu ca uaau  aggcagu    c
|||||||  ||||||||  ||| || ||||  |||||||     
guucgac  guguaacg  aaa gu auua  ucugucg    u
       cg        ag   a  a    ca       aaaa
Get sequence
Deep sequencing
2 reads, 2 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr22: 20073269-20073356 [+]
sense
OTTHUMT00000318655 ; DGCR8-002; exon 1
OTTHUMT00000318656 ; DGCR8-003; 3'UTR (exon 1)
OTTHUMT00000318655 ; DGCR8-002; exon 1
OTTHUMT00000318656 ; DGCR8-003; 3'UTR (exon 1)
OTTHUMT00000318654 ; DGCR8-001; 3'UTR (exon 2)
OTTHUMT00000319850 ; DGCR8-009; 3'UTR (exon 2)
OTTHUMT00000318654 ; DGCR8-001; 3'UTR (exon 2)
OTTHUMT00000319850 ; DGCR8-009; 3'UTR (exon 2)
OTTHUMT00000318654 ; DGCR8-001; 3'UTR (exon 2)
OTTHUMT00000319850 ; DGCR8-009; 3'UTR (exon 2)
ENST00000495826 ; DGCR8-002; exon 1
ENST00000407755 ; DGCR8-003; 3'UTR (exon 1)
ENST00000495826 ; DGCR8-002; exon 1
ENST00000407755 ; DGCR8-003; 3'UTR (exon 1)
ENST00000351989 ; DGCR8-001; 3'UTR (exon 2)
ENST00000457069 ; DGCR8-009; 3'UTR (exon 2)
ENST00000383024 ; DGCR8-201; 3'UTR (exon 2)
ENST00000351989 ; DGCR8-001; 3'UTR (exon 2)
ENST00000457069 ; DGCR8-009; 3'UTR (exon 2)
ENST00000383024 ; DGCR8-201; 3'UTR (exon 2)
ENST00000351989 ; DGCR8-001; 3'UTR (exon 2)
ENST00000457069 ; DGCR8-009; 3'UTR (exon 2)
ENST00000383024 ; DGCR8-201; 3'UTR (exon 2)
Clustered miRNAs
< 10kb from hsa-mir-3618
hsa-mir-3618 chr22: 20073269-20073356 [+]
hsa-mir-1306 chr22: 20073581-20073665 [+]
Database links

Mature sequence hsa-miR-3618

Accession MIMAT0017998
Sequence

52 -  

ugucuacauuaaugaaaagagc

 - 73

Get sequence
Deep sequencing 2 reads, 2 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).