Stem-loop sequence vvi-MIR3623

Accession MI0016015
Description Vitis vinifera miR3623 stem-loop
Stem-loop 
        u    a    ca       a             uaaagcucaaac      ac      c 
aagaauuu gaug ucuu  caaguuc uccaagcaccauc            aggccu  gguuuu u
|||||||| |||| ||||  ||||||| |||||||||||||            ||||||  ||||||  
uucuugaa uuac agaa  guuuaag agguucgugguag            uucgga  ucaaaa u
        -    a    uc       c             ------uacuua      --      c
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Genome context
Coordinates (Genoscope-20100122) Overlapping transcripts
chr18: 24650012-24650140 [+]
intergenic

Mature sequence vvi-miR3623-5p

Accession MIMAT0018007
Previous IDs vvi-miR3623*
Sequence

18 -  

ucacaaguucauccaagcacca

 - 39

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Evidence experimental; Solexa [1]

Mature sequence vvi-miR3623-3p

Accession MIMAT0018008
Previous IDs vvi-miR3623
Sequence

92 -  

uggugcuuggacgaauuugcua

 - 113

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Evidence experimental; Solexa [1]

References

1
PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis" Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J Plant J. 62:960-976(2010).