Stem-loop dme-mir-3641

Accession

MI0016041

Description

Drosophila melanogaster dme-mir-3641 precursor miRNA

Sequence

69 reads, 18 reads per million, 33 experiments

GUGAGUGUCCUGUUUACAGCugguauauuuuucgaaaagcccUCUAAACUGGUCACUUCCACUCuacag
(((((((.((.(((((.((..(((..............))))).))))).)).))))..))).......

Structure

-------   --    U  U     C  Cu   auauuu 
       GUG  AGUG CC GUUUA AG  ggu      u
       |||  |||| || ||||| ||  |||       
       CAC  UCAC GG CAAAU Uc  ccg      u
gacauCU   CU    U  U     C  --   aaaagc 

Annotation confidence Not enough data

Genome context

chrX: 2171086-2171154 [+]

Mature dme-miR-3641-5p

• Accession: MIMAT0018055
• Description: Drosophila melanogaster dme-miR-3641-5p mature miRNA
• Sequence: 1 - GUGAGUGUCCUGUUUACAGC - 20
• Evidence: experimental ; Illumina [1]

Mature dme-miR-3641-3p

• Accession: MIMAT0018056
• Description: Drosophila melanogaster dme-miR-3641-3p mature miRNA
• Sequence: 43 - UCUAAACUGGUCACUUCCACUC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20620959
   MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila
   "Flynt AS, Greimann JC, Chung WJ, Lima CD, Lai EC"
   "Mol Cell (2010) 38:900-907