miRBase entry: dme-mir-3645

Stem-loop dme-mir-3645


Accession
MI0016045
Description
Drosophila melanogaster dme-mir-3645 precursor miRNA


Sequence

32 reads, 17 reads per million, 18 experiments
GUGAGUGCAGGCUGUUUAUUGcggcgcuguuuacuguuuacgaucgcacuggaagugcgcuuuccggcgccUUUGGAAGCCAGCACUCAAGUuuccuucauuguuuuccuuucuuuccccucucucucuccccgcag
.(((((((.((((.((((....(((((((............((.((((((...))))))...)))))))))..)))))))).)))))))................................................

Structure
-----------------------------------------------G       A    G    UUGc       uuuacuguuuac  --u      g 
                                                UGAGUGC GGCU UUUA    ggcgcug            ga   cgcacu  
                                                ||||||| |||| ||||    |||||||            ||   |||||| g
                                                ACUCACG CCGA AGGU    ccgcggc            cu   gcguga  
gacgccccucucucucuccccuuucuuuccuuuuguuacuuccuuUGA       A    -    --UU       ------------  uuc      a 


Annotation confidence Not enough data
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Genome context
chrX: 5622280-5622416 [-]

Database links

Mature dme-miR-3645-5p

Accession MIMAT0018063
Description Drosophila melanogaster dme-miR-3645-5p mature miRNA
Sequence 1 - GUGAGUGCAGGCUGUUUAUUG - 21
Evidence experimental
Illumina [1]

Mature dme-miR-3645-3p

Accession MIMAT0018064
Description Drosophila melanogaster dme-miR-3645-3p mature miRNA
Sequence 72 - UUUGGAAGCCAGCACUCAAGU - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20620959
    MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila
    "Flynt AS, Greimann JC, Chung WJ, Lima CD, Lai EC"
    "Mol Cell (2010) 38:900-907