miRBase entry: hsa-mir-3689a

Stem-loop hsa-mir-3689a


Accession
MI0016090
Symbol
HGNC: MIR3689A
Description
Homo sapiens hsa-mir-3689a precursor miRNA
Gene family
MIPF0001144; mir-3689

Literature search
1 open access papers mention hsa-mir-3689a
(1 sentences)

Sequence

98 reads, 7 reads per million, 7 experiments
ccugggaggUGUGAUAUCAUGGUUCCUGGGAggugugauccugugcuucCUGGGAGGUGUGAUAUCGUGGUuccuggg
((((((((.((((((((((((.(((((((((((((........))))))))))))).)))))))))))).))))))))

Structure
        g            G             uga 
ccugggag UGUGAUAUCAUG UUCCUGGGAggug   u
|||||||| |||||||||||| |||||||||||||    
ggguccuU GUGCUAUAGUGU GAGGGUCcuucgu   c
        G            G             guc 


Annotation confidence Not enough data
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Genome context
chr9: 134849487-134849564 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from hsa-mir-3689a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-3689a-5p

Accession MIMAT0018117
Description Homo sapiens hsa-miR-3689a-5p mature miRNA
Sequence 10 - UGUGAUAUCAUGGUUCCUGGGA - 31
Evidence experimental
Illumina [1-2]

Mature hsa-miR-3689a-3p

Accession MIMAT0018118
Description Homo sapiens hsa-miR-3689a-3p mature miRNA
Sequence 50 - CUGGGAGGUGUGAUAUCGUGGU - 71
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 20224791
    Discovery of novel microRNAs in female reproductive tract using next generation sequencing
    Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
    PLoS One (2010) 5:e9637

  2. PubMed ID: 20459673
    Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood
    Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A
    BMC Genomics (2010) 11:288