miRBase entry: pab-MIR3706

Stem-loop pab-MIR3706


Accession
MI0016108
Description
Picea abies pab-MIR3706 precursor miRNA


Sequence

gcaaaugacaguuauauugcaugguuucggaggaauggguaagaccauucucauugcauggUUUCGGAGGAAUGGAUAAGAcaauugcg
((((......(((.((((.(((..((((((((((((((......)))))))...........)))))))..))))))).)))..)))).

Structure
-    augaca   a    g   gg       -----------       gu 
 gcaa      guu uauu cau  uuucgga           ggaaugg  a
 ||||      ||| |||| |||  |||||||           |||||||   
 cguu      cAG AUAG GUA  GAGGCUU           ucuuacc  a
g    ----aa   A    -   AG       Ugguacguuac       ag 


Annotation confidence Not enough data
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Genome context
MA_133151: 7144-7232 [-]

Database links

Mature pab-miR3706

Accession MIMAT0018138
Description Picea abies pab-miR3706 mature miRNA
Sequence 62 - UUUCGGAGGAAUGGAUAAGA - 81
Evidence experimental
cloned [1]

References

  1. PubMed ID: 20561211
    MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
    "Yakovlev IA, Fossdal CG, Johnsen O"
    "New Phytol (2010) 187:1154-1169